Details for Phenotype: Leaf shape index external II (ID: 44)

Phenotype ID:
44
Name:
Leaf shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_01ANN08011.6243United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08021.5625United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08031.6006United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08041.6766United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08051.5976United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08061.4294United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08071.5763United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08081.8676United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08091.5957United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08101.6656United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_02ANN08111.3489United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08122.1549United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08131.9648United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08141.218United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08151.4029United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08161.4886United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08171.603United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08181.74United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08201.6525United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_03ANN08211.7672United StatesCalifornia36.24542-120.31654
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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