Details for Phenotype: Trichomes density center average (ID: 40)

Phenotype ID:
40
Name:
Trichomes density center average
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Trichomes
Type:
Quantitative
Ontology:
leaf trichome density
Unit:
trichomes/cm2
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Density of trichomes near the leaf main vein
Phenotype Scoring
A high resolution scan (2400 dpi) was taken of a 1.2 cm wide section of the abaxial side perpedicular to the leaf main vein, of the same leaf used for morphometric measurements. The number of non-glandular trichomes was determined in 1 cm2 region near the edge of the leaf and near the main vein. Trichomes on leaf surface or on secondary veins were counted separately using Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_44ANN123775.0United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN123868.5United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN123975.0United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN124098.5United StatesTexas29.05186-99.01808
Helianthus annuusANN_45ANN124167.5United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN124287.5United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN124363.0United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN124467.5United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN124572.5United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN124668.5United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN124761.5United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN124867.5United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN124925.5United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN125052.0United StatesTexas28.63085-100.1189
Helianthus annuusANN_46ANN125145.5United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN125228.5United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN125352.0United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN125431.5United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN125573.0United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN125657.0United StatesCalifornia33.92321-116.86432
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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