Details for Phenotype: Trichomes density center average (ID: 40)

Phenotype ID:
40
Name:
Trichomes density center average
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Trichomes
Type:
Quantitative
Ontology:
leaf trichome density
Unit:
trichomes/cm2
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Density of trichomes near the leaf main vein
Phenotype Scoring
A high resolution scan (2400 dpi) was taken of a 1.2 cm wide section of the abaxial side perpedicular to the leaf main vein, of the same leaf used for morphometric measurements. The number of non-glandular trichomes was determined in 1 cm2 region near the edge of the leaf and near the main vein. Trichomes on leaf surface or on secondary veins were counted separately using Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_60ANN139955.0United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN140049.0United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN140151.5United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140252.0United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140341.5United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140442.0United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140550.5United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140622.5United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140781.0United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140871.5United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140947.0United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN141048.5United StatesTexas27.77652-97.66801
Helianthus annuusANN_62ANN141921.0United StatesIowa42.24842-96.05867
Helianthus annuusANN_62ANN142039.5United StatesIowa42.24842-96.05867
Helianthus annuusANN_64ANN143933.0United StatesKansas39.68894-99.06605
Helianthus annuusANN_71ANN150116.5CanadaSaskatchewan49.23184-102.9884
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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