Details for Phenotype: Trichomes density leaf center flat area (ID: 37)

Phenotype ID:
37
Name:
Trichomes density leaf center flat area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Trichomes
Type:
Quantitative
Ontology:
leaf trichome density
Unit:
trichomes/cm2
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Density of trichomes outside secondary veins near the leaf main vein
Phenotype Scoring
A high resolution scan (2400 dpi) was taken of a 1.2 cm wide section of the abaxial side perpedicular to the leaf main vein, of the same leaf used for morphometric measurements. The number of non-glandular trichomes was determined in 1 cm2 region near the edge of the leaf and near the main vein. Trichomes on leaf surface or on secondary veins were counted separately using Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_01ANN080188.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080262.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN0803109.5United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080482.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080574.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080687.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080772.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080845.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080911.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN081027.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_02ANN081165.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081256.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081361.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081480.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN0815105.5United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN0816100.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081761.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081886.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN082044.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_03ANN082162.0United StatesCalifornia36.24542-120.31654
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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dominik.grimm [at] hswt.de

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