Details for Phenotype: Trichomes density leaf edge flat area (ID: 35)

Phenotype ID:
35
Name:
Trichomes density leaf edge flat area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Trichomes
Type:
Quantitative
Ontology:
leaf trichome density
Unit:
trichomes/cm2
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Density of trichomes outside secondary veins near the leaf edge
Phenotype Scoring
A high resolution scan (2400 dpi) was taken of a 1.2 cm wide section of the abaxial side perpedicular to the leaf main vein, of the same leaf used for morphometric measurements. The number of non-glandular trichomes was determined in 1 cm2 region near the edge of the leaf and near the main vein. Trichomes on leaf surface or on secondary veins were counted separately using Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_01ANN080195.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080249.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN0803104.5United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN0804124.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080555.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080646.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080774.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080862.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN080917.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN081064.0United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_02ANN081174.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081240.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081348.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081471.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081593.5United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081696.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081741.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN081868.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN082052.0United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_03ANN082156.0United StatesCalifornia36.24542-120.31654
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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dominik.grimm [at] hswt.de

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