Details for Phenotype: Ligule length (ID: 17)

Phenotype ID:
17
Name:
Ligule length
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Inflorescence traits
Sub-Category:
Ligules
Type:
Quantitative
Ontology:
ligule length
Unit:
cm
#Samples:
570
#Populations:
62
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length of individual ligules
Phenotype Scoring
Average of three ligules length measurements performed on each of the first three inflorescences produced by each plant. Inflorescences were collected in the field, and front and back digital pictures were taken in the lab using a setup that provided even illumination. A size and colour standard was included in each picture. Measuements were taken using the Fiji software (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (62 Populations with 570 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_01ANN08014.965216054United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08023.890856552United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08034.605045605United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08043.689747062United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08054.804856928United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08064.661517335United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08086.589108455United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08094.719423007United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08104.266957575United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_02ANN08115.624137718United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08125.451859026United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08135.509755249United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08144.023228019United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08155.772395105United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08164.376362614United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08175.946625304United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08184.125032344United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08193.778948958United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08205.339130161United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_03ANN08214.217446199United StatesCalifornia36.24542-120.31654
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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