Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_55ANN13410.351575United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13420.3881875United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13430.386175United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13440.3850625United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13450.405875United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13460.3362125United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13470.351925United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13480.379375United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13500.36185United StatesTexas28.66061-96.58348
Helianthus annuusANN_56ANN13510.38125United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13520.3718375United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13530.3359375United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13540.3792625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13550.373575United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13560.3671625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13590.3578125United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13600.3575United StatesTexas28.08852-97.06011
Helianthus annuusANN_57ANN13610.374725United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13630.3623375United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13640.3496625United StatesTexas27.63854-97.24526
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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dominik.grimm [at] hswt.de

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