Details for Phenotype: Seed perimeter (ID: 66)

Phenotype ID:
66
Name:
Seed perimeter
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Perimeter of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_59ANN138210.3051125United StatesTexas26.50251-97.77181
Helianthus annuusANN_09ANN088410.3196375United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN088610.3361375United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_26ANN105110.587575United StatesUtah37.13733-113.51348
Helianthus annuusANN_59ANN138710.65855United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN138110.6897United StatesTexas26.50251-97.77181
Helianthus annuusANN_61ANN140710.7777625United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140110.779175United StatesTexas27.77652-97.66801
Helianthus annuusANN_59ANN138810.806225United StatesTexas26.50251-97.77181
Helianthus annuusANN_54ANN133110.833625United StatesTexas29.11355-97.39837
Helianthus annuusANN_02ANN081910.9057125United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_10ANN089110.95805United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_57ANN136111.037175United StatesTexas27.63854-97.24526
Helianthus annuusANN_04ANN083111.0554125United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_45ANN124111.1111875United StatesTexas28.63085-100.1189
Helianthus annuusANN_58ANN137111.1227875United StatesTexas28.24166-97.67443
Helianthus annuusANN_60ANN139211.2040375United StatesTexas27.28522-97.66729
Helianthus annuusANN_55ANN135011.246675United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN134411.2496125United StatesTexas28.66061-96.58348
Helianthus annuusANN_60ANN139511.29445United StatesTexas27.28522-97.66729
Publications
HeliantHOME is a public database for sunflower phenotypes (© 2021-2022) About | Imprint
Legal Notice
Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
Type of business: Research Institute

Disclaimer
This website provides information about public research data. We make no guarantees of accuracy, completeness and timeliness of the infomration on this website. We, therefore, accept no responsibility or liability for damages or losses resulting from the use of this website. This website provides links to other internet sites for the convenience of users. We are not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee any commercial product, service, site, law firm, attorney or information described or offered at these other internet sites.