Details for Phenotype: RGB proportion blue (ID: 59)

Phenotype ID:
59
Name:
RGB proportion blue
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of blue in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_07ANN08640.16954023United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08650.190177426United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08660.197429546United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08670.158577288United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08680.205321512United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08690.188808672United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_08ANN08710.214586577United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08720.22641729United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08730.182721153United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08740.199554538United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08750.199601808United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08760.182218614United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08770.190669681United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08780.201727454United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08790.201187667United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08800.218200095United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_09ANN08810.208507494United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08820.218956188United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08830.194332105United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08840.221161617United StatesCalifornia37.43321-118.40646
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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