Details for Phenotype: RGB proportion blue (ID: 59)

Phenotype ID:
59
Name:
RGB proportion blue
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of blue in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_50ANN12970.246956024United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12980.218479644United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12990.23022806United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN13000.236180748United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_51ANN13010.214896555United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13020.180174794United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13030.231946825United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13040.235400058United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13050.252885822United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13060.258607923United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13070.235099296United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13080.096341951United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13090.242947036United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13100.258187367United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_52ANN13110.241848119United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13120.235904173United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13130.199272505United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13140.245211101United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13150.228583042United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13160.26053987United StatesTexas31.13312-104.02012
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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