Details for Phenotype: RGB proportion blue (ID: 59)

Phenotype ID:
59
Name:
RGB proportion blue
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of blue in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_46ANN12540.218391872United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12550.247545091United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12560.23095307United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12570.245192166United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12580.222055437United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12590.238038746United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12600.231216013United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_47ANN12610.221221439United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12620.215853574United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12630.226181831United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12640.211854437United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12650.253410547United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12660.227229278United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12670.258082947United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12680.236491435United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12690.247899062United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12700.23606955United StatesArizona32.73158-111.53769
Helianthus annuusANN_48ANN12710.193809041United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12720.184911929United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12730.222218009United StatesArizona31.5081-111.01274
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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