Details for Phenotype: RGB proportion blue (ID: 59)

Phenotype ID:
59
Name:
RGB proportion blue
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of blue in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_03ANN08220.230448658United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08230.182595336United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08240.240765502United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08250.173495328United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08260.210859794United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08270.210645242United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08280.232973075United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08290.218607673United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08300.22101775United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_04ANN08310.211596221United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08320.191108054United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08330.217905873United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08350.221485398United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08360.221051587United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08370.207399713United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08380.187813568United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08390.208916502United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08400.234016034United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_05ANN08410.222260961United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08420.195148624United StatesCalifornia33.69278-116.18411
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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