Details for Phenotype: RGB proportion blue (ID: 59)

Phenotype ID:
59
Name:
RGB proportion blue
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of blue in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_36ANN11520.224690778United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11530.209284764United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11540.233189911United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11550.209261761United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11560.220845781United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11570.223708066United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11590.162666575United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11600.184159132United StatesWyoming41.77426-107.45885
Helianthus annuusANN_37ANN11610.2152372United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11620.206273981United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11630.220443986United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11640.197820924United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11650.251151954United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11660.23477127United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11670.251184077United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11680.189011687United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11690.238035927United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11700.267441707United StatesColorado40.48679-105.09619
Helianthus annuusANN_38ANN11710.220692628United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11720.234224908United StatesKansas38.44118-98.63231
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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