Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_09ANN08850.461337152United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08860.459816659United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08880.473284223United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08890.471508847United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08900.462214372United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_10ANN08910.454484812United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08920.441535478United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08930.464100701United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08940.469323568United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08950.498829688United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08960.467709508United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08970.475621833United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08980.461204373United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08990.449970078United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN09000.46376733United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_11ANN09010.451782075United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09020.442859569United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09030.441950039United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09040.449743205United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09050.455110369United StatesArizona35.19566-114.06666
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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