Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_05ANN08430.472970903United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08440.494011578United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08450.470488993United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08460.465122937United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08470.455848462United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08480.488576534United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08490.448618617United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08500.458574463United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_06ANN08510.469778698United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08520.444806204United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08530.459954394United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08540.429669119United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08550.458798198United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08560.453251122United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08570.462504665United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08580.443184512United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08590.449360573United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08600.453637524United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_07ANN08620.461116147United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08630.464721555United StatesCalifornia38.7892-119.9363
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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