Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_40ANN11930.466206724United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11940.430006526United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11950.433786765United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11960.442679321United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11980.445242015United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11990.441940129United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN12000.458326479United StatesKansas37.23327-98.66459
Helianthus annuusANN_41ANN12010.441597406United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12020.46027977United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12030.451290643United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12040.461981582United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12050.438894553United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12060.464566986United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12070.42836588United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12080.431976208United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12090.459842658United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12100.441222219United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_42ANN12110.44920922United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12120.458738781United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12130.444444444United StatesTexas32.92224-97.36547
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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