Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_29ANN10900.480892423United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10910.446314504United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10920.447744493United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10930.435297176United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10940.484713135United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10950.475374838United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10960.485182252United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10970.481776598United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10980.487200127United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10990.487482896United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN11000.476087368United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11010.487689139United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11030.475203926United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11040.468781718United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11050.455132438United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11060.463797636United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11070.479233684United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11080.448518763United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11090.480357071United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11100.48455401United StatesUtah40.1781-111.65071
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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