Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_19ANN09890.447178547United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09900.443945007United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_20ANN09910.488557845United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09920.476067024United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09930.457888401United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09940.464446963United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09950.460242397United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09960.459773513United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09970.447784577United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09980.456377315United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09990.441226744United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN10000.45299961United StatesColorado38.44366-107.62928
Helianthus annuusANN_21ANN10010.455028688United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10020.467252468United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10030.47012363United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10040.440759076United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10050.475656272United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10060.46665641United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10070.472774398United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10080.459746904United StatesColorado38.91004-108.3738
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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