Details for Phenotype: Leaf shape index internal (ID: 54)

Phenotype ID:
54
Name:
Leaf shape index internal
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the internal ellipse's height to its width
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_50ANN12951.5182United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12961.6212United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12971.8793United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12981.0787United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12991.8357United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN13001.9392United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_51ANN13011.9085United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13021.4889United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13031.0United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13041.7713United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13051.3909United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13061.4726United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13071.5797United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13081.963United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13091.6387United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13100.9255United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_52ANN13111.9469United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13121.3106United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13130.9141United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13141.4485United StatesTexas31.13312-104.02012
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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