Details for Phenotype: Leaf shape index external II (ID: 44)

Phenotype ID:
44
Name:
Leaf shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_15ANN09462.0641United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09471.5778United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09481.4838United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09491.3233United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09501.8674United StatesArizona35.03852-110.7351
Helianthus annuusANN_16ANN09511.8355United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09521.5752United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09531.6487United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09542.0033United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09551.7211United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09561.7725United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09571.8746United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09581.7872United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09591.9441United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09602.2469United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_17ANN09612.1267United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09621.9474United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09631.4881United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09641.5881United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09651.0762United StatesNew Mexico35.24503-107.68594
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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