Details for Phenotype: Leaf shape index external II (ID: 44)

Phenotype ID:
44
Name:
Leaf shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_50ANN12951.7129United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12961.6292United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12971.8635United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12981.4849United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12992.1097United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN13001.938United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_51ANN13011.8987United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13021.4897United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13031.5862United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13041.7707United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13051.5714United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13061.9145United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13071.5933United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13081.9631United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13091.6321United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13101.5969United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_52ANN13112.0327United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13121.4768United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13131.4703United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13141.664United StatesTexas31.13312-104.02012
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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