Details for Phenotype: Leaf shape index external II (ID: 44)

Phenotype ID:
44
Name:
Leaf shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_46ANN12531.6533United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12541.8199United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12551.9735United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12562.2006United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12571.4873United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12581.3909United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12591.5829United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12601.7904United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_47ANN12611.8566United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12622.045United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12632.142United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12642.5779United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12652.0858United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12661.9075United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12671.6747United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12681.9106United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12692.2475United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12702.3929United StatesArizona32.73158-111.53769
Helianthus annuusANN_48ANN12712.3844United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12722.5115United StatesArizona31.5081-111.01274
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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