Details for Phenotype: Trichomes density leaf center secondary veins (ID: 38)

Phenotype ID:
38
Name:
Trichomes density leaf center secondary veins
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Trichomes
Type:
Quantitative
Ontology:
leaf trichome density
Unit:
trichomes/cm2
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Density of trichomes on secondary veins near the leaf main vein
Phenotype Scoring
A high resolution scan (2400 dpi) was taken of a 1.2 cm wide section of the abaxial side perpedicular to the leaf main vein, of the same leaf used for morphometric measurements. The number of non-glandular trichomes was determined in 1 cm2 region near the edge of the leaf and near the main vein. Trichomes on leaf surface or on secondary veins were counted separately using Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_34ANN113435.0United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN113561.0United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN113671.0United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN1137109.0United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN113869.0United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN113975.0United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN114042.0United StatesUtah40.69149-112.26423
Helianthus annuusANN_35ANN114147.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114253.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114358.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114491.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114535.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114694.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114722.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114854.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114934.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN115018.0United StatesUtah40.51274-109.51947
Helianthus annuusANN_36ANN1151145.0United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN1152105.0United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN115349.0United StatesWyoming41.77426-107.45885
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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