Details for Phenotype: Trichomes density leaf edge flat area (ID: 35)

Phenotype ID:
35
Name:
Trichomes density leaf edge flat area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Trichomes
Type:
Quantitative
Ontology:
leaf trichome density
Unit:
trichomes/cm2
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Density of trichomes outside secondary veins near the leaf edge
Phenotype Scoring
A high resolution scan (2400 dpi) was taken of a 1.2 cm wide section of the abaxial side perpedicular to the leaf main vein, of the same leaf used for morphometric measurements. The number of non-glandular trichomes was determined in 1 cm2 region near the edge of the leaf and near the main vein. Trichomes on leaf surface or on secondary veins were counted separately using Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN121751.0United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN121898.0United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1219107.0United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN122047.0United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN122183.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN122263.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN122359.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN122471.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN122566.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1226101.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN122747.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN122868.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN122995.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN123044.0United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN123170.0United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN123235.0United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN123364.0United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN123471.0United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN123574.0United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN123671.0United StatesTexas29.05186-99.01808
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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dominik.grimm [at] hswt.de

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