Details for Phenotype: Total RGB (ID: 299)

Phenotype ID:
299
Name:
Total RGB
Species:
Helianthus petiolaris subsp. petiolaris
Species NCBI-ID:
74151
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
157
#Populations:
18
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (18 Populations with 157 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus petiolaris subsp. petiolarisPET_14PET0431177.001United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_14PET0432176.474United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_14PET0433181.518United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_14PET0434166.065United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_14PET0435177.557United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_14PET0436196.554United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_14PET0438183.619United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_14PET0439187.245United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_14PET0440169.837United StatesUtah40.55035-109.91641
Helianthus petiolaris subsp. petiolarisPET_15PET0441207.368United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0442174.684United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0443179.452United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0444152.677United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0445210.135United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0446194.655United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0447156.758United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0448179.746United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0449172.043United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_15PET0450187.915United StatesColorado40.69709-105.61168
Helianthus petiolaris subsp. petiolarisPET_16PET0451195.548United StatesColorado40.38047-104.52282
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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