Details for Phenotype: Ligule length (ID: 17)

Phenotype ID:
17
Name:
Ligule length
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Inflorescence traits
Sub-Category:
Ligules
Type:
Quantitative
Ontology:
ligule length
Unit:
cm
#Samples:
570
#Populations:
62
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length of individual ligules
Phenotype Scoring
Average of three ligules length measurements performed on each of the first three inflorescences produced by each plant. Inflorescences were collected in the field, and front and back digital pictures were taken in the lab using a setup that provided even illumination. A size and colour standard was included in each picture. Measuements were taken using the Fiji software (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (62 Populations with 570 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_55ANN13455.698046999United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13464.730300134United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13475.66214878United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13485.170210173United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13496.352162247United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13505.848079656United StatesTexas28.66061-96.58348
Helianthus annuusANN_56ANN13515.181144418United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13524.551093157United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13535.16363512United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13545.594215104United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13555.243713975United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13564.700367028United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13576.194404824United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13585.456610678United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13595.709733183United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13605.774995866United StatesTexas28.08852-97.06011
Helianthus annuusANN_57ANN13615.011079922United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13624.898396344United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13636.525853883United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13646.471322845United StatesTexas27.63854-97.24526
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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