Details for Phenotype: Ligule length (ID: 17)

Phenotype ID:
17
Name:
Ligule length
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Inflorescence traits
Sub-Category:
Ligules
Type:
Quantitative
Ontology:
ligule length
Unit:
cm
#Samples:
570
#Populations:
62
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length of individual ligules
Phenotype Scoring
Average of three ligules length measurements performed on each of the first three inflorescences produced by each plant. Inflorescences were collected in the field, and front and back digital pictures were taken in the lab using a setup that provided even illumination. A size and colour standard was included in each picture. Measuements were taken using the Fiji software (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (62 Populations with 570 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_45ANN12445.332191174United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12455.401095925United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12465.436931261United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12474.462784538United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12485.088988637United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12493.803335914United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12505.163232384United StatesTexas28.63085-100.1189
Helianthus annuusANN_46ANN12516.022420115United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12524.873504789United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12535.975543279United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12544.703681314United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12555.831584803United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12565.859088529United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12576.311969959United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12585.922047622United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12595.315613514United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12605.654758478United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_47ANN12615.026688929United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12626.840493404United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12634.859207812United StatesArizona32.73158-111.53769
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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