Details for Phenotype: Ligule length (ID: 17)

Phenotype ID:
17
Name:
Ligule length
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Inflorescence traits
Sub-Category:
Ligules
Type:
Quantitative
Ontology:
ligule length
Unit:
cm
#Samples:
570
#Populations:
62
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length of individual ligules
Phenotype Scoring
Average of three ligules length measurements performed on each of the first three inflorescences produced by each plant. Inflorescences were collected in the field, and front and back digital pictures were taken in the lab using a setup that provided even illumination. A size and colour standard was included in each picture. Measuements were taken using the Fiji software (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (62 Populations with 570 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_19ANN09904.83157577United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_20ANN09915.191620146United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09925.297663593United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09934.314760359United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09955.451451298United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09965.092448573United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09975.475007763United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09984.358563721United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09995.807727485United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN10004.701699831United StatesColorado38.44366-107.62928
Helianthus annuusANN_21ANN10015.258242993United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10025.7395024United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10035.348412763United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10045.717355096United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10054.81166989United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10064.882736841United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10075.280991338United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10086.548507029United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10095.065935911United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10104.820076588United StatesColorado38.91004-108.3738
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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