Details for Phenotype: RGB proportion red (ID: 115)

Phenotype ID:
115
Name:
RGB proportion red
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_01ARG00010.309609489United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00020.3211321United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00030.307712999United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00040.315941964United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00050.317226372United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00060.315706426United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00070.31360952United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00080.314320262United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00090.320093355United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00100.310880699United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_02ARG00110.312978152United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00120.317314263United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00130.317056803United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00150.323956352United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00160.314418093United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00170.313845721United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00180.32426874United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00190.310553525United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00200.317146392United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_03ARG00210.320870049United StatesTexas29.31939-97.7441
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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