Details for Phenotype: RGB proportion green (ID: 114)

Phenotype ID:
114
Name:
RGB proportion green
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_01ARG00010.414195985United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00020.429263144United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00030.411728722United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00040.434134926United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00050.415769888United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00060.432001025United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00070.436766214United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00080.423396778United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00090.430540567United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG00100.389906341United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_02ARG00110.434858001United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00120.424616429United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00130.438933407United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00150.449753985United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00160.422434256United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00170.40408114United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00180.437845819United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00190.419279772United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG00200.411892544United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_03ARG00210.43977544United StatesTexas29.31939-97.7441
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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