Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_01ARG0001213.976United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0002232.135United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0003230.494United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0004224.345United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0005218.746United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0006218.643United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0007226.224United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0008229.912United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0009227.946United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_01ARG0010239.378United StatesTexas29.6465-97.69094
Helianthus argophyllusARG_02ARG0011202.995United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG0012235.615United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG0013202.664United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG0015228.645United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG0016236.335United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG0017248.705United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG0018211.997United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG0019215.293United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_02ARG0020252.158United StatesTexas29.43897-97.73836
Helianthus argophyllusARG_03ARG0021208.586United StatesTexas29.31939-97.7441
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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